Package org.phenotips.vocabulary

Interface Summary

Interface	Description
SolrCoreContainerHandler	Provides access to the configured Solr instance.
SolrVocabularyResourceManager	Provides methods for initializing the resources needed by vocabularies stored in a Solr index.
Vocabulary	Provides access to a vocabulary, such as the HUGO Gene Nomenclature, or the Human Phenotype Ontology.
VocabularyExtension	Allows extending a base vocabulary with additional annotations.
VocabularyInputTerm	A vocabulary term that has been parsed from a vocabulary source during reindexing, exposing the already parsed fields and allowing new fields to be added.
VocabularyManager	Provides access to the available vocabularies and their terms.
VocabularySourceRelocationService	Provides methods for accessing the location of the vocabulary source files to reindex vocabulary from a different location.
VocabularyTerm	A term from a Vocabulary.

Class Summary

Class	Description
AbstractCSVAnnotationsExtension	Implements VocabularyExtension to annotate VocabularyInputTerm from supported vocabularies with data from a tab- or comma-separated file.