@Unstable
@Role
public interface MedSavantServer
| Modifier and Type | Method and Description |
|---|---|
List<net.sf.json.JSONArray> |
getFilteredVariants(Patient patient)
Get all the "interesting" variants stored for a patient, where "interesting" means that certain quality, rarity
and harmfulness thresholds have been passed.
|
List<net.sf.json.JSONArray> |
getPatientVariants(Patient patient)
Get all the variants stored for a patient.
|
boolean |
hasVCF(Patient patient)
Check if there are any variants stored for a patient in MedSavant.
|
boolean |
uploadVCF(Patient patient)
Upload the VCF files attached to a patient to MedSavant.
|
boolean uploadVCF(Patient patient)
patient - the patient to processtrue if the upload was successful, false otherwiseboolean hasVCF(Patient patient)
patient - the patient to checktrue if there are variants for this patient, false otherwiseList<net.sf.json.JSONArray> getPatientVariants(Patient patient)
patient - the patient to processList<net.sf.json.JSONArray> getFilteredVariants(Patient patient)
patient - the patient to processCopyright © 2011–2015 University of Toronto, Computational Biology Lab. All rights reserved.