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getFilteredVariants(Patient) - Method in interface org.phenotips.integration.medsavant.MedSavantServer

Get all the "interesting" variants stored for a patient, where "interesting" means that certain quality, rarity and harmfulness thresholds have been passed.

getPatientVariants(Patient) - Method in interface org.phenotips.integration.medsavant.MedSavantServer

Get all the variants stored for a patient.

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hasVCF(Patient) - Method in interface org.phenotips.integration.medsavant.MedSavantServer

Check if there are any variants stored for a patient in MedSavant.

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MedSavantServer - Interface in org.phenotips.integration.medsavant

Communication with a MedSavant server.

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org.phenotips.integration.medsavant - package org.phenotips.integration.medsavant

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uploadVCF(Patient) - Method in interface org.phenotips.integration.medsavant.MedSavantServer

Upload the VCF files attached to a patient to MedSavant.

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