org.phenotips.studies.family.migrations

Class R71500PhenoTips2944DataMigration

java.lang.Object

com.xpn.xwiki.store.migration.hibernate.AbstractHibernateDataMigration

org.phenotips.studies.family.migrations.R71500PhenoTips2944DataMigration

All Implemented Interfaces:

com.xpn.xwiki.store.migration.DataMigration, com.xpn.xwiki.store.migration.hibernate.HibernateDataMigration, com.xpn.xwiki.store.XWikiHibernateBaseStore.HibernateCallback<Object>

@Component
@Named(value="R71500-PT-2944")
@Singleton
public class R71500PhenoTips2944DataMigration
extends com.xpn.xwiki.store.migration.hibernate.AbstractHibernateDataMigration
implements com.xpn.xwiki.store.XWikiHibernateBaseStore.HibernateCallback<Object>

Migration for PhenoTips issue PT-2944: translate existing gene data in pedigree from gene name to Ensembl gene IDs.

Since:

1.3M5

Version:

$Id: 4a1b83aa9f574fadf160d90d8744f625799fc5e1 $

Field Summary

Fields inherited from class com.xpn.xwiki.store.migration.hibernate.AbstractHibernateDataMigration

componentManager

Constructor Summary

Constructors

Constructor and Description
R71500PhenoTips2944DataMigration()

Method Summary

Methods

Modifier and Type	Method and Description
Object	doInHibernate(org.hibernate.Session session)
String	getDescription()
com.xpn.xwiki.store.migration.XWikiDBVersion	getVersion()
void	hibernateMigrate()

Methods inherited from class com.xpn.xwiki.store.migration.hibernate.AbstractHibernateDataMigration

getLiquibaseChangeLog, getName, getPreHibernateLiquibaseChangeLog, getStore, getXWikiContext, migrate, shouldExecute

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

R71500PhenoTips2944DataMigration

public R71500PhenoTips2944DataMigration()

Method Detail

getDescription

public String getDescription()

Specified by:

getDescription in interface com.xpn.xwiki.store.migration.DataMigration

getVersion

public com.xpn.xwiki.store.migration.XWikiDBVersion getVersion()

Specified by:

getVersion in interface com.xpn.xwiki.store.migration.DataMigration

hibernateMigrate

public void hibernateMigrate()
                      throws com.xpn.xwiki.store.migration.DataMigrationException,
                             com.xpn.xwiki.XWikiException

Specified by:

hibernateMigrate in class com.xpn.xwiki.store.migration.hibernate.AbstractHibernateDataMigration

Throws:

com.xpn.xwiki.store.migration.DataMigrationException

com.xpn.xwiki.XWikiException

doInHibernate

public Object doInHibernate(org.hibernate.Session session)
                     throws org.hibernate.HibernateException,
                            com.xpn.xwiki.XWikiException

Specified by:

doInHibernate in interface com.xpn.xwiki.store.XWikiHibernateBaseStore.HibernateCallback<Object>

Throws:

org.hibernate.HibernateException

com.xpn.xwiki.XWikiException