Index (PhenoTips - Application configuration

C E G I O P R S T U

C

containsPrivateIdentifiableInformation() - Method in interface org.phenotips.configuration.RecordElement: Deprecated.
since 1.4, this functionality has moved in the Consents module
containsPrivateIdentifiableInformation() - Method in class org.phenotips.configuration.spi.UIXRecordElement
CUSTOM_PREFERENCES_CLASS - Static variable in interface org.phenotips.configuration.RecordConfiguration: Deprecated.
since 1.4, this is specific to studies and has been moved in a different module

E

elements - Variable in class org.phenotips.configuration.spi.UIXRecordSection
enabled - Variable in class org.phenotips.configuration.spi.UIXRecordSection
expanded - Variable in class org.phenotips.configuration.spi.UIXRecordSection
extension - Variable in class org.phenotips.configuration.spi.UIXRecordSection

G

getActiveConfiguration() - Method in interface org.phenotips.configuration.RecordConfigurationManager: Deprecated.
since 1.4, use RecordConfigurationManager.getConfiguration(String) instead
getActiveConfiguration() - Method in class org.phenotips.configuration.script.RecordConfigurationManagerScriptService: Deprecated.
since 1.4, use getConfiguration(String) instead
getAllElements() - Method in interface org.phenotips.configuration.RecordSection: The list of elements configured in this section, whether they are enabled or not.
getAllElements() - Method in class org.phenotips.configuration.spi.UIXRecordSection
getAllFieldNames() - Method in interface org.phenotips.configuration.RecordConfiguration: The list of available fields, enabled or disabled, that can be displayed in this type of record.
getAllSections() - Method in interface org.phenotips.configuration.RecordConfiguration: The list of available sections, enabled or disabled, that can be displayed in this type of record.
getConfiguration(String) - Method in interface org.phenotips.configuration.RecordConfigurationManager: Retrieves the RecordConfiguration active for the current user on a specific record type.
getConfiguration(String) - Method in class org.phenotips.configuration.script.RecordConfigurationManagerScriptService: Retrieves the RecordConfiguration active for the current user on a specific record type.
getContainingSection() - Method in interface org.phenotips.configuration.RecordElement: The parent section containing this element.
getContainingSection() - Method in class org.phenotips.configuration.spi.UIXRecordElement
getDateOfBirthFormat() - Method in interface org.phenotips.configuration.RecordConfiguration: The format to use for entering and displaying the date of birth and other dates.
getDisplayedFields() - Method in interface org.phenotips.configuration.RecordElement: The list of fields displayed in the record by this element.
getDisplayedFields() - Method in class org.phenotips.configuration.spi.UIXRecordElement
getEnabledElements() - Method in interface org.phenotips.configuration.RecordSection: The list of elements displayed in this section.
getEnabledElements() - Method in class org.phenotips.configuration.spi.UIXRecordSection
getEnabledFieldNames() - Method in interface org.phenotips.configuration.RecordConfiguration: The list of fields enabled for this record type.
getEnabledNonIdentifiableFieldNames() - Method in interface org.phenotips.configuration.RecordConfiguration: Deprecated.
since 1.4, this functionality has moved in the Consents module
getEnabledSections() - Method in interface org.phenotips.configuration.RecordConfiguration: The list of sections enabled for this record type.
getExtension() - Method in interface org.phenotips.configuration.RecordElement: The extension defining this element.
getExtension() - Method in interface org.phenotips.configuration.RecordSection: The extension defining this section.
getExtension() - Method in class org.phenotips.configuration.spi.UIXRecordElement
getExtension() - Method in class org.phenotips.configuration.spi.UIXRecordSection
getISODateFormat() - Method in interface org.phenotips.configuration.RecordConfiguration: The date format compliant with the ISO 8601 standard, in the Java date format.
getName() - Method in interface org.phenotips.configuration.RecordElement: The name of this element, displayed in the form designer.
getName() - Method in interface org.phenotips.configuration.RecordSection: The name of this section, displayed in the record and in the form designer.
getName() - Method in class org.phenotips.configuration.spi.UIXRecordElement
getName() - Method in class org.phenotips.configuration.spi.UIXRecordSection
getPhenotypeMapping() - Method in interface org.phenotips.configuration.RecordConfiguration: The custom predefined phenotypes displayed in the "Clinical Symptoms" section are configured in a document, and this type of configuration is called a "Phenotype Mapping".
getPriority() - Method in interface org.phenotips.configuration.spi.RecordConfigurationModule: The priority of this implementation.
GLOBAL_PREFERENCES_CLASS - Static variable in interface org.phenotips.configuration.RecordConfiguration: The XClass used for storing the global configuration.

I

isEnabled() - Method in interface org.phenotips.configuration.RecordElement: Whether this element is going to be displayed in the record or not.
isEnabled() - Method in interface org.phenotips.configuration.RecordSection: Whether this section and its elements are going to be displayed in the record or not.
isEnabled() - Method in class org.phenotips.configuration.spi.UIXRecordElement
isEnabled() - Method in class org.phenotips.configuration.spi.UIXRecordSection
isExpandedByDefault() - Method in interface org.phenotips.configuration.RecordSection: Whether this section should be expanded and fully visible in edit mode by default.
isExpandedByDefault() - Method in class org.phenotips.configuration.spi.UIXRecordSection

O

orderFilter - Variable in class org.phenotips.configuration.spi.UIXRecordSection: Sorts fields by their declared order.
org.phenotips.configuration - package org.phenotips.configuration
org.phenotips.configuration.script - package org.phenotips.configuration.script
org.phenotips.configuration.spi - package org.phenotips.configuration.spi

P

process(RecordConfiguration) - Method in interface org.phenotips.configuration.spi.RecordConfigurationModule: Configures how the record appears.

R

RecordConfiguration - Interface in org.phenotips.configuration: Exposes the configuration for displaying records.
RecordConfigurationManager - Interface in org.phenotips.configuration: Provides access to record configurations.
RecordConfigurationManagerScriptService - Class in org.phenotips.configuration.script: Provides access to RecordConfiguration record configurations.
RecordConfigurationManagerScriptService() - Constructor for class org.phenotips.configuration.script.RecordConfigurationManagerScriptService
RecordConfigurationModule - Interface in org.phenotips.configuration.spi: Modular record configuration service which provides or alters the record configuration according to a specific purpose.
RecordElement - Interface in org.phenotips.configuration: A single field or a small subset of related fields displayed in a RecordSection section.
RecordSection - Interface in org.phenotips.configuration: Represents a section that can be displayed in a record.

S

setDateOfBirthFormat(String) - Method in interface org.phenotips.configuration.RecordConfiguration: Update the format of the date of birth.
setElements(List<RecordElement>) - Method in interface org.phenotips.configuration.RecordSection: Set the list of elements configured in this section.
setElements(List<RecordElement>) - Method in class org.phenotips.configuration.spi.UIXRecordSection
setEnabled(boolean) - Method in interface org.phenotips.configuration.RecordElement: Sets whether this element is going to be displayed in the record or not.
setEnabled(boolean) - Method in interface org.phenotips.configuration.RecordSection: Set whether this section and its elements are going to be displayed in the record or not.
setEnabled(boolean) - Method in class org.phenotips.configuration.spi.UIXRecordElement
setEnabled(boolean) - Method in class org.phenotips.configuration.spi.UIXRecordSection
setExpandedByDefault(boolean) - Method in interface org.phenotips.configuration.RecordSection: Set whether this section should be expanded and fully visible in edit mode by default.
setExpandedByDefault(boolean) - Method in class org.phenotips.configuration.spi.UIXRecordSection
setPhenotypeMapping(DocumentReference) - Method in interface org.phenotips.configuration.RecordConfiguration: Update the preferred phenotype mapping.
setSections(List<RecordSection>) - Method in interface org.phenotips.configuration.RecordConfiguration: Update the list of available section.
supportsRecordType(String) - Method in interface org.phenotips.configuration.spi.RecordConfigurationModule: Indicates whether this configuration modules supports a specific type of record.

T

toString() - Method in class org.phenotips.configuration.spi.UIXRecordElement
toString() - Method in class org.phenotips.configuration.spi.UIXRecordSection

U

uixManager - Variable in class org.phenotips.configuration.spi.UIXRecordSection: Lists the contained fields.
UIXRecordElement - Class in org.phenotips.configuration.spi: An implementation for RecordElement which reads the configuration from an UIExtension xobject.
UIXRecordElement(UIExtension, RecordSection) - Constructor for class org.phenotips.configuration.spi.UIXRecordElement: Simple constructor, taking a UI extension and the parent record section as parameters.
UIXRecordSection - Class in org.phenotips.configuration.spi: An implementation for RecordSection which reads the configuration from an UIExtension xobject.
UIXRecordSection(UIExtension, UIExtensionManager, UIExtensionFilter) - Constructor for class org.phenotips.configuration.spi.UIXRecordSection: Simple constructor, taking the UI extension, the uixManager UI extension manager, and the orderFilter UI extension filter as parameters.

C E G I O P R S T U