G I O P R S

G

getAvailablePushTargets() - Method in interface org.phenotips.data.push.PushPatientService

getAvailablePushTargets() - Method in class org.phenotips.data.push.script.PushPatientScriptService

getConsents() - Method in interface org.phenotips.data.push.PushServerConfigurationResponse

Get the list of consents available on the remote server.

getLastPushAgeInDays() - Method in interface org.phenotips.data.push.PatientPushHistory

getLastPushAgeInHours() - Method in interface org.phenotips.data.push.PatientPushHistory

getLastPushTime() - Method in interface org.phenotips.data.push.PatientPushHistory

getLocalPatientJSON(String, String) - Method in interface org.phenotips.data.push.PushPatientService

Returns the (specified subset of) patient data in JSON format.

getLocalPatientJSON(String, String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

getPatientPushHistory(String, String) - Method in interface org.phenotips.data.push.PushPatientService

getPatientPushHistory(String, String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

getPatientURL(String, String, String, String, String) - Method in interface org.phenotips.data.push.PushPatientData

Gets the remote patient ID and URL for viewing the remote patient.

getPatientURL(String, String) - Method in interface org.phenotips.data.push.PushPatientService

getPatientURL(String, String, String, String) - Method in interface org.phenotips.data.push.PushPatientService

getPatientURL(String, String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

getPatientURL(String, String, String, String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

getPushableFields(String) - Method in interface org.phenotips.data.push.PushServerConfigurationResponse

Get the intersection of locally available non-personally identifiable fields and fields accepted by the remote server.
The list may or may not be different depending on the remote group.

getPushableFields() - Method in interface org.phenotips.data.push.PushServerConfigurationResponse

getPushTargetsWithHistory(String) - Method in interface org.phenotips.data.push.PushPatientService

getPushTargetsWithHistory(String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

getRemoteAcceptedPatientFields(String) - Method in interface org.phenotips.data.push.PushServerConfigurationResponse

Get the list of patient data fields accepted by the remote server.

getRemoteAcceptedPatientFields() - Method in interface org.phenotips.data.push.PushServerConfigurationResponse

getRemoteConfiguration(String, String, String, String) - Method in interface org.phenotips.data.push.PushPatientData

Retrieves the list of patient fields accepted by the remote server as well as the list of groups the given remote user is a member of on the remote server.

getRemoteConfiguration(String, String, String, boolean) - Method in interface org.phenotips.data.push.PushPatientService

Retrieves the list of patient fields accepted by the remote server as well as the list of groups the given remote user is a member of on the remote server.

getRemoteConfiguration(String) - Method in interface org.phenotips.data.push.PushPatientService

Same as above, but uses the previously stored remote user name and login token to authenticate on the remote server.

getRemoteConfiguration(String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

getRemoteConfiguration(String, String, String, boolean) - Method in class org.phenotips.data.push.script.PushPatientScriptService

getRemotePatientGUID() - Method in interface org.phenotips.data.push.PatientPushHistory

getRemotePatientGUID() - Method in interface org.phenotips.data.push.PushServerGetPatientIDResponse

GUID of the remote patient object, which can be used to update remote patient data or to get the current remote patient URL.

getRemotePatientID() - Method in interface org.phenotips.data.push.PatientPushHistory

getRemotePatientID() - Method in interface org.phenotips.data.push.PushServerGetPatientIDResponse

Current remote URL of the patient created or patient updated.

getRemotePatientURL() - Method in interface org.phenotips.data.push.PatientPushHistory

getRemotePatientURL() - Method in interface org.phenotips.data.push.PushServerGetPatientIDResponse

Current remote URL of the patient created or patient updated.

getRemoteUserGroups() - Method in interface org.phenotips.data.push.PushServerConfigurationResponse

Get the list of remote PhenoTips group names the given remote user is a member of.

getRemoteUsername(String) - Method in interface org.phenotips.data.push.PushPatientService

Get the previously stored remote username associated with the current user and the given remote server

getRemoteUsername(String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

getRemoteUserToken() - Method in interface org.phenotips.data.push.PushServerConfigurationResponse

Get the user_token for future passwordless patient data pushes to the same server by the same remote user.

getServerDescription() - Method in interface org.phenotips.data.push.PushServerInfo

getServerID() - Method in interface org.phenotips.data.push.PushServerInfo

getServerURL() - Method in interface org.phenotips.data.push.PushServerInfo

I

isActionFailed() - Method in interface org.phenotips.data.push.PushServerResponse

isActionFailed_GUIDAccessDenied() - Method in interface org.phenotips.data.push.PushServerSendPatientResponse

isActionFailed_incorrectGroup() - Method in interface org.phenotips.data.push.PushServerSendPatientResponse

isActionFailed_IncorrectGUID() - Method in interface org.phenotips.data.push.PushServerSendPatientResponse

isActionFailed_isUnknownAction() - Method in interface org.phenotips.data.push.PushServerResponse

isActionFailed_knownReason() - Method in interface org.phenotips.data.push.PushServerResponse

isActionFailed_MissingConsent() - Method in interface org.phenotips.data.push.PushServerSendPatientResponse

isActionFailed_UpdatesDisabled() - Method in interface org.phenotips.data.push.PushServerSendPatientResponse

isClientDoesNotAcceptServerProtocolVersion() - Method in interface org.phenotips.data.push.PushServerResponse

isLoginFailed() - Method in interface org.phenotips.data.push.PushServerResponse

isLoginFailed_IncorrectCredentials() - Method in interface org.phenotips.data.push.PushServerResponse

isLoginFailed_knownReason() - Method in interface org.phenotips.data.push.PushServerResponse

isLoginFailed_TokensNotSuported() - Method in interface org.phenotips.data.push.PushServerResponse

isLoginFailed_UnauthorizedServer() - Method in interface org.phenotips.data.push.PushServerResponse

isLoginFailed_UserTokenExpired() - Method in interface org.phenotips.data.push.PushServerResponse

isServerDoesNotAcceptClientProtocolVersion() - Method in interface org.phenotips.data.push.PushServerResponse

isSuccessful() - Method in interface org.phenotips.data.push.PushServerResponse

Returns the status of the requested action.

O

org.phenotips.data.push - package org.phenotips.data.push

org.phenotips.data.push.script - package org.phenotips.data.push.script

P

PatientPushHistory - Interface in org.phenotips.data.push

Stores information about previous pushes of a single patient to a given remote server.

PushPatientData - Interface in org.phenotips.data.push

API that allows pushing patient data to a remote PhenoTips instance.

PushPatientScriptService - Class in org.phenotips.data.push.script

API that allows pushing patient data to a remote PhenoTips instance (plus helper methods useful for displaying push patient UI).

PushPatientScriptService() - Constructor for class org.phenotips.data.push.script.PushPatientScriptService

PushPatientService - Interface in org.phenotips.data.push

A wrapper around PushPatientData which deals with saving and retrieval of remote user names and tokens and provides methods for reading the list of push targets.

PushServerConfigurationResponse - Interface in org.phenotips.data.push

API that allows pushing patient data to a remote PhenoTips instance.

PushServerGetPatientIDResponse - Interface in org.phenotips.data.push

API that allows pushing patient data to a remote PhenoTips instance.

PushServerInfo - Interface in org.phenotips.data.push

Contains information about one PhenoTips server which cab be used as a push target for patient data.

PushServerResponse - Interface in org.phenotips.data.push

API that allows pushing patient data to a remote PhenoTips instance.

PushServerSendPatientResponse - Interface in org.phenotips.data.push

API that allows pushing patient data to a remote PhenoTips instance.

R

remoteUpdatesEnabled() - Method in interface org.phenotips.data.push.PushServerConfigurationResponse

Indicates whether remote server allows updates of existing patients.

removeStoredLoginTokens(String) - Method in interface org.phenotips.data.push.PushPatientService

Removes stored remote login token, if any - for security purposes

removeStoredLoginTokens(String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

S

sendPatient(Patient, Set<String>, JSONObject, String, String, String, String, String, String) - Method in interface org.phenotips.data.push.PushPatientData

Submits the specified subset of patient data to the specified remote server.

sendPatient(String, String, String, String, String, String, String, String) - Method in interface org.phenotips.data.push.PushPatientService

Submits the specified subset of patient data to the specified remote server.

sendPatient(String, String, String, String, String, String) - Method in interface org.phenotips.data.push.PushPatientService

Same as above, but uses the previously stored remote user name and login token to authenticate on the remote server.

sendPatient(String, String, String, String, String, String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

sendPatient(String, String, String, String, String, String, String, String) - Method in class org.phenotips.data.push.script.PushPatientScriptService

G I O P R S