4.0.0 org.phenotips phenotips-distribution 1.0-milestone-8 phenotips-war PhenoTips - War package war org.xwiki.enterprise:xwiki-enterprise-web org.phenotips:phenotips-ui org.xwiki.enterprise xwiki-enterprise-web ${xwiki.version} war ${project.groupId} component-registry ${project.version} ${project.groupId} solr-access-service ${project.version} org.apache.httpcomponents httpclient org.apache.httpcomponents httpcore commons-io commons-io ${project.groupId} ontology-access ${project.version} org.apache.httpcomponents httpclient org.apache.httpcomponents httpcore commons-io commons-io ${project.groupId} patient-data-api ${project.version} ${project.groupId} patient-data-migrations ${project.version} ${project.groupId} patient-data-indexing ${project.version} ${project.groupId} patient-measurements-api ${project.version} ${project.groupId} patient-measurements-migrations ${project.version} ${project.groupId} application-configuration-migrations ${project.version} ${project.groupId} patient-tools ${project.version} ${project.groupId} ncbieutils-services-api ${project.version} ${project.groupId} phenotype-mapping-service ${project.version} ${project.groupId} patient-update-listeners ${project.version} ${project.groupId} obo2solr ${project.version} ${project.groupId} patient-similarity-data ${project.version} ${project.groupId} patient-similarity-search ${project.version} ${project.groupId} pedigree-editor ${project.version} provided org.hsqldb hsqldb 2.2.9 mysql mysql-connector-java 5.1.24 org.slf4j log4j-over-slf4j ${slf4j.version} ch.qos.logback logback-classic 1.0.11 org.apache.maven.plugins maven-remote-resources-plugin xwiki-configuration-resources xwiki-platform-tool-configuration-resources process org.xwiki.platform:xwiki-platform-tool-configuration-resources:${xwiki.version} jdbc:hsqldb:file:${environment.permanentDirectory}/database/xwiki_db;shutdown=true sa org.hsqldb.jdbcDriver org.hibernate.dialect.HSQLDialect xwiki.hbm.xml feeds.hbm.xml activitystream.hbm.xml \ com.xpn.xwiki.monitor.api.MonitorPlugin,\ com.xpn.xwiki.plugin.skinx.JsSkinExtensionPlugin,\ com.xpn.xwiki.plugin.skinx.JsSkinFileExtensionPlugin,\ com.xpn.xwiki.plugin.skinx.JsResourceSkinExtensionPlugin,\ com.xpn.xwiki.plugin.skinx.CssSkinExtensionPlugin,\ com.xpn.xwiki.plugin.skinx.CssSkinFileExtensionPlugin,\ com.xpn.xwiki.plugin.skinx.CssResourceSkinExtensionPlugin,\ com.xpn.xwiki.plugin.skinx.LinkExtensionPlugin,\ com.xpn.xwiki.plugin.feed.FeedPlugin,\ com.xpn.xwiki.plugin.mail.MailPlugin,\ com.xpn.xwiki.plugin.packaging.PackagePlugin,\ com.xpn.xwiki.plugin.svg.SVGPlugin,\ com.xpn.xwiki.plugin.fileupload.FileUploadPlugin,\ com.xpn.xwiki.plugin.image.ImagePlugin,\ com.xpn.xwiki.plugin.zipexplorer.ZipExplorerPlugin,\ com.xpn.xwiki.plugin.lucene.LucenePlugin,\ com.xpn.xwiki.plugin.diff.DiffPlugin,\ com.xpn.xwiki.plugin.rightsmanager.RightsManagerPlugin,\ com.xpn.xwiki.plugin.jodatime.JodaTimePlugin,\ com.xpn.xwiki.plugin.scheduler.SchedulerPlugin,\ com.xpn.xwiki.plugin.mailsender.MailSenderPlugin,\ com.xpn.xwiki.plugin.activitystream.plugin.ActivityStreamPlugin, \ com.xpn.xwiki.plugin.watchlist.WatchListPlugin, \ com.xpn.xwiki.plugin.tag.TagPlugin 0 0 0 colibri colibri UTF-8 xwiki.plugin.watchlist.automaticwatch=none xwiki.authentication.group.allgroupimplicit=1 xwiki.section.edit=0 xwiki.backlinks=0 xwiki.showviewaction=0 xwiki.defaultweb=data xwiki.usedefaultweb=1 xwiki.usedefaultaction=0 xwiki.monitor=0 /var/lib/phenotips/ model.reference.default.space=data extension.repositories=maven-xwiki:maven:http://nexus.xwiki.org/nexus/content/groups/public extension.repositories=maven-phenotips:maven:http://nexus.cs.toronto.edu/nexus/content/repositories/releases/ extension.repositories=extensions.xwiki.org:xwiki:http://extensions.xwiki.org/xwiki/rest/ org.apache.maven.plugins maven-war-plugin ${project.build.directory}/maven-shared-archive-resources/META-INF META-INF ${project.build.directory}/maven-shared-archive-resources WEB-INF xwiki.cfg xwiki.properties hibernate.cfg.xml WEB-INF/lib/xwiki-commons-component-api-*.jar, WEB-INF/lib/xwiki-commons-component-default-*.jar, WEB-INF/lib/xwiki-rendering-api-*.jar, WEB-INF/lib/xwiki-platform-oldcore-*.jar, WEB-INF/lib/xwiki-platform-office-importer-*.jar, WEB-INF/lib/batik-js-*.jar, WEB-INF/lib/commons-logging-*.jar, %regex[WEB-INF/lib/log4j-(?!over-slf4j).*.jar], WEB-INF/lib/activation-*.jar, WEB-INF/lib/commons-lang-2.5.jar, WEB-INF/lib/asm-3.1.jar, WEB-INF/lib/guava-12.0.jar, WEB-INF/lib/jdom-1.0.jar, WEB-INF/lib/jdom-1.1.jar, WEB-INF/lib/log4j-over-slf4j-1.7.2.jar, WEB-INF/lib/logback-classic-1.0.9.jar, WEB-INF/lib/logback-core-1.0.9.jar, WEB-INF/lib/plexus-utils-2.0.6.jar, WEB-INF/lib/rome-0.9.jar, WEB-INF/lib/slf4j-api-1.7.2.jar, WEB-INF/lib/woodstox-core-asl-4.1.1.jar, WEB-INF/lib/xercesImpl-2.10.0.jar ${project.groupId} pedigree-editor jar resources/uicomponents/ org.apache.maven.plugins maven-enforcer-plugin enforce-banned-dependencies enforce org.jmock:* junit:* javax.servlet:servlet-api:*:*:compile org.jmock:*:*:*:test junit:*:*:*:test